Pulse Brain · Growing Health Evidence Index
Peer-reviewed

The MR-Base platform supports systematic causal inference across the human phenome

Gibran Hemani, Jie Zheng, Benjamin Elsworth, Kaitlin H. Wade, Valeriia Haberland, Denis Baird, Charles Laurin, Stephen Burgess, Jack Bowden, Ryan Langdon, Vanessa Y. Tan, James Yarmolinsky, Hashem A. Shihab, Nicholas J. Timpson, David M. Evans, Caroline L. Relton, Richard M. Martin, George Davey Smith, Tom R. Gaunt, Philip Haycock

eLife · 2018

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Summary

Results from genome-wide association studies (GWAS) can be used to infer causal relationships between phenotypes, using a strategy known as 2-sample Mendelian randomization (2SMR) and bypassing the need for individual-level data. However, 2SMR methods are evolving rapidly and GWAS results are often insufficiently curated, undermining efficient implementation of the approach. We therefore developed MR-Base (<ext-link ext-link-type="uri" xlink:href="http://www.mrbase.org">http://www.mrbase.org</ext-link>): a platform that integrates a curated database of complete GWAS results (no restrictions according to statistical significance) with an application programming interface, web app and R packages that automate 2SMR. The software includes several sensitivity analyses for assessing the impact o

Source type
Peer-reviewed study
DOI
10.7554/elife.34408
Catalogue ID
BFmokjo8sc-s77t8i
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