Pulse Brain · Growing Health Evidence Index
Tier 3 — Observational / field trialPreprint

Bottom trawling impacts on faunal and microbial communities increase seafloor carbon loss

Bonthond, G.; Beermann, J.; Wrede, A.; Sidorenko, V.; Schupp, P. J.; Gutow, L.

bioRxiv · 2026

Read source ↗ All evidence

Summary

The seafloor is the largest organic carbon sink on Earth. Its benthic fauna and microbiota jointly regulate long-term carbon storage by assimilating and degrading sedimentary organic matter (SOM). Bottom trawling threatens the long-term storage of organic matter by physical disturbance of the seafloor and remobilization of SOM. Trawling also impacts faunal and microbial communities and their diversity, but the implications of these ecological consequences for long-term carbon storage dynamics are poorly understood. Here, we combined datasets of paired faunal and microbial communities from the North Sea and used structural equation modeling to disentangle direct and biotically mediated effects of bottom trawling on SOM. One third of trawling-induced SOM loss is indirect and mediated by shifts in benthic faunal and microbial communities. Microbial community structure directly affected SOM and represented a key link in this pathway. Microbial effects on SOM were strongly tied to changes in metabolic traits. SOM loss coincides with increased microbial aerobic respiration potential, whereas SOM increases correlated with microbial assimilation processes, including dark carbon fixation. Benthic fauna impact SOM indirectly by shaping benthic microbial communities. Faunal diversity and species traits related to bioturbation promoted shifts in benthic microbiota that favor OM storage, corroborating their indirect but essential role in seafloor carbon dynamics. This study reveals that bottom trawling alters seafloor carbon storage not only through physical disturbance but also by disrupting faunal-microbial interactions that regulate sediment carbon dynamics. Taxonomic and functional shifts in benthic microbiota are a key, but underestimated, component of the processes regulating the seafloor carbon sink and warrant better integration of benthic biodiversity and ecological processes into assessments of seafloor carbon storage under anthropogenic pressures.

Outcomes reported

The seafloor is the largest organic carbon sink on Earth. Its benthic fauna and microbiota jointly regulate long-term carbon storage by assimilating and degrading sedimentary organic matter (SOM). Bottom trawling threatens the long-term storage of organic matter by physical disturbance of the seafloor and remobilization of SOM. Trawling also impacts faunal and microbial communities and their diversity, but the implications of these ecological consequences for long-term carbon storage dynamics are poorly understood. Here, we combined datasets of paired faunal and microbial communities from the North Sea and used structural equation modeling to disentangle direct and biotically mediated effects of bottom trawling on SOM. One third of trawling-induced SOM loss is indirect and mediated by shifts in benthic faunal and microbial communities. Microbial community structure directly affected SOM and represented a key link in this pathway. Microbial effects on SOM were strongly tied to changes in metabolic traits. SOM loss coincides with increased microbial aerobic respiration potential, whereas SOM increases correlated with microbial assimilation processes, including dark carbon fixation. Benthic fauna impact SOM indirectly by shaping benthic microbial communities. Faunal diversity and species traits related to bioturbation promoted shifts in benthic microbiota that favor OM storage, corroborating their indirect but essential role in seafloor carbon dynamics. This study reveals that bottom trawling alters seafloor carbon storage not only through physical disturbance but also by disrupting faunal-microbial interactions that regulate sediment carbon dynamics. Taxonomic and functional shifts in benthic microbiota are a key, but underestimated, component of the processes regulating the seafloor carbon sink and warrant better integration of benthic biodiversity and ecological processes into assessments of seafloor carbon storage under anthropogenic pressures.

Theme
Farming systems, soils & land use
Subject
Gut microbiome & human health
Study type
Research
Source type
Preprint
Status
Preprint
Geography
United Kingdom
System type
Other
DOI
10.64898/2026.01.29.702536
Catalogue ID
IRmoq8418w-60f8fb
Pulse AI · ask about this record

Dig deeper with Pulse AI.

Pulse AI has read the whole catalogue. Ask about this record, its theme, or how the findings apply to UK farming and policy — every answer cites the underlying studies.