Pulse Brain · Growing Health Evidence Index
Peer-reviewed

A mouse tissue atlas of small noncoding RNA

Alina Isakova, Tobias Fehlmann, Andreas Keller, Stephen R. Quake

Proceedings of the National Academy of Sciences · 2020

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Summary

Small noncoding RNAs (ncRNAs) play a vital role in a broad range of biological processes both in health and disease. A comprehensive quantitative reference of small ncRNA expression would significantly advance our understanding of ncRNA roles in shaping tissue functions. Here, we systematically profiled the levels of five ncRNA classes (microRNA [miRNA], small nucleolar RNA [snoRNA], small nuclear RNA [snRNA], small Cajal body-specific RNA [scaRNA], and transfer RNA [tRNA] fragments) across 11 mouse tissues by deep sequencing. Using 14 biological replicates spanning both sexes, we identified that ∼30% of small ncRNAs are distributed across the body in a tissue-specific manner with some also being sexually dimorphic. We found that some miRNAs are subject to "arm switching" between healthy t

Source type
Peer-reviewed study
DOI
10.1073/pnas.2002277117
Catalogue ID
SNmoj1yi92-weeky4
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