Pulse Brain · Growing Health Evidence Index
Tier 3 — Observational / field trialPeer-reviewed

Systematically Prioritizing Candidates in Genome-Based Drug Repurposing

Anup P. Challa, Robert R. Lavieri, Judith T. Lewis, Nicole M. Zaleski, Jana K. Shirey-Rice, Paul A. Harris, David M. Aronoff, Jill M. Pulley

Assay and Drug Development Technologies · 2019

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Summary

This paper presents a systematic methodology for prioritising drug repurposing candidates by integrating pharmacological data from DrugBank with genomic information and longitudinal clinical records from a large de-identified DNA repository (BioVU) at Vanderbilt University Medical Centre. The authors identified approximately 230 practical opportunities for genomic drug repurposing and developed a pipeline of 14 candidates across 7 disease areas. The approach demonstrates how target genomics can be combined with existing drug databases and clinical data to identify high-potential candidates for repurposing in randomised controlled trials.

UK applicability

The methodology is technology and database-agnostic and could be adapted to UK healthcare systems with equivalent electronic health record and genomic repositories, such as those within the NHS. However, direct application would require access to comparable large-scale linked genomic and clinical data systems in the United Kingdom.

Key measures

Target-action pairs; pharmacodynamic variables; marketing variables; genomic data quality control thresholds; disease areas; repurposing candidate pipeline

Outcomes reported

The study identified approximately 230 target-action pairs representing practical opportunities for genomic drug repurposing, and narrowed these to a pipeline of 14 repurposing candidates across 7 disease areas. The candidates were selected based on integration of pharmacodynamic and marketing variables with genomic quality control thresholds derived from electronic health record data.

Theme
General food systems / other
Subject
Other / interdisciplinary
Study type
Research
Study design
Methodological framework / database analysis
Source type
Peer-reviewed study
Status
Published
Geography
United States
System type
Human clinical
DOI
10.1089/adt.2019.950
Catalogue ID
BFmoso8xrl-pctw6l

Topic tags

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