Pulse Brain · Growing Health Evidence Index
Peer-reviewed

Chromatin accessibility dynamics in a model of human forebrain development

Alexandro E. Trevino, Nasa Sinnott-Armstrong, Jimena Andersen, Se‐Jin Yoon, Nina Huber, Jonathan K. Pritchard, Howard Y. Chang, William J. Greenleaf, Sergiu P. Pașca

Science · 2020

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Summary

Forebrain development is characterized by highly synchronized cellular processes, which, if perturbed, can cause disease. To chart the regulatory activity underlying these events, we generated a map of accessible chromatin in human three-dimensional forebrain organoids. To capture corticogenesis, we sampled glial and neuronal lineages from dorsal or ventral forebrain organoids over 20 months in vitro. Active chromatin regions identified in human primary brain tissue were observed in organoids at different developmental stages. We used this resource to map genetic risk for disease and to explore evolutionary conservation. Moreover, we integrated chromatin accessibility with transcriptomics to identify putative enhancer-gene linkages and transcription factors that regulate human corticogenes

Subject
Other / interdisciplinary
Source type
Peer-reviewed study
System type
Other
DOI
10.1126/science.aay1645
Catalogue ID
SNmoj1yoga-ugyc2b
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