Pulse Brain · Growing Health Evidence Index
Tier 1 — Meta-analysis / systematic reviewPeer-reviewed

Meta-analyses identify DNA methylation associated with kidney function and damage

Pascal Schlosser, Adrienne Tin, Pamela R. Matías‐García, Chris H. L. Thio, Roby Joehanes, Hongbo Liu, Antoine Weihs, Zhi Yu, Anselm Hoppmann, Franziska Grundner-Culemann, Josine L. Min, Adebowale Adeyemo, Charles Agyemang, Johan Ärnlöv, N. Ahmad Aziz, Andrea Baccarelli, Murielle Bochud, Hermann Brenner, Monique M.B. Breteler, Cristian Carmeli, Layal Chaker, John C. Chambers, Shelley A. Cole, Josef Coresh, Tanguy Corre, Adolfo Correa, Simon R. Cox, Niek de Klein, Graciela E. Delgado, Arce Domingo‐Relloso, Kai‐Uwe Eckardt, Arif B. Ekici, Karlhans Endlich, Kathryn L. Evans, James S. Floyd, Myriam Fornage, Lude Franke, Eliza Fraszczyk, Xu Gao, Xīn Gào, Mohsen Ghanbari, Sahar Ghasemi, Christian Gieger, Philip Greenland, Megan L. Grove, Sarah E. Harris, Gibran Hemani, Peter Henneman, Christian Herder, Steve Horvath, Lifang Hou, Mikko A. Hurme, Shih‐Jen Hwang, Marjo‐Riitta Järvelin, Sharon L. R. Kardia, Silva Kasela, Marcus E. Kleber, Wolfgang Köenig, Jaspal S. Kooner, Holly Kramer, Florian Kronenberg, Brigitte Kühnel, Terho Lehtimäki, Lars Lind, Dan Liu, Yongmei Liu, Donald M. Lloyd‐Jones, Kurt Lohman, Stefan Lorkowski, Ake T. Lu, Riccardo E. Marioni, Winfried März, Daniel L. McCartney, Karlijn Meeks, Lili Milani, Pashupati P. Mishra, Matthias Nauck, Ana Navas‐Acién, Christoph Nowak, Annette Peters, Holger Prokisch, Bruce M. Psaty, Olli T. Raitakari, Scott M. Ratliff, Alex P. Reiner, Sylvia E. Rosas, Ben Schöttker, Joel Schwartz, Sanaz Sedaghat, Jennifer A. Smith, Nona Sotoodehnia, Hannah Stocker, Silvia Stringhini, Johan Sundström, Brenton R. Swenson, María Téllez-Plaza, Joyce B. J. van Meurs, Jana V. van Vliet‐Ostaptchouk, Andrea Venema, Niek Verweij

Nature Communications · 2021

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Summary

This international meta-analysis of epigenome-wide association studies identified 69 and 7 blood DNA methylation sites respectively linked to kidney function (eGFR) and kidney damage (UACR) across 33,605 and 15,068 participants. Several methylation associations at genes including JAZF1, PELI1, CHD2, PHRF1, LDB2, CSRNP1 and IRF5 were validated in kidney tissue or showed evidence of causal effects on kidney function. The findings suggest DNA methylation in blood may serve as an epigenetic biomarker for kidney disease risk and reveal pathways involving hemostasis, blood cell migration and immune activation.

UK applicability

These findings are potentially applicable to UK clinical practice as chronic kidney disease affects a significant proportion of the population. The identification of blood-based DNA methylation biomarkers could support early detection and risk stratification in UK kidney disease screening programmes, though validation in UK cohorts and clinical implementation studies would be required.

Key measures

Blood-based DNA methylation at CpG sites; estimated glomerular filtration rate (eGFR); urinary albumin-to-creatinine ratio (UACR); chronic kidney disease; albuminuria

Outcomes reported

The study identified 69 CpG sites where blood DNA methylation was associated with estimated glomerular filtration rate (kidney function) and 7 CpG sites associated with urinary albumin-to-creatinine ratio (kidney damage). These methylation associations showed directional consistency with clinical outcomes of chronic kidney disease and albuminuria.

Theme
Nutrition & health
Subject
Measurement methods & nutrient profiling
Study type
Meta-analysis
Study design
Meta-analysis (epigenome-wide association study)
Source type
Peer-reviewed study
Status
Published
Geography
International
System type
Human clinical
DOI
10.1038/s41467-021-27234-3
Catalogue ID
SNmoj7nui9-xjy70t

Topic tags

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