Pulse Brain · Growing Health Evidence Index
Tier 1 — Meta-analysis / systematic reviewPeer-reviewed

Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models

Ying‐Wooi Wan, Rami Al‐Ouran, Carl Grant Mangleburg, Thanneer M. Perumal, Tom V. Lee, Katherine Allison, Vivek Swarup, Cory C. Funk, Chris Gaiteri, Mariet Allen, Minghui Wang, Sarah M. Neuner, Catherine C. Kaczorowski, Vivek M. Philip, Gareth R. Howell, Heidi Martini‐Stoica, Hui Zheng, Hongkang Mei, Xiaoyan Zhong, Jungwoo Wren Kim, Valina L. Dawson, Ted M. Dawson, Ping‐Chieh Pao, Li‐Huei Tsai, Jean‐Vianney Haure‐Mirande, Michelle E. Ehrlich, Paramita Chakrabarty, Yona Levites, Xue Wang, Eric B. Dammer, Gyan Srivastava, Sumit Mukherjee, Solveig K. Sieberts, Larsson Omberg, Kristen K. Dang, James A. Eddy, Phil Snyder, Yooree Chae, Sandeep Amberkar, Wenbin Wei, Winston Hide, Christoph Preuß, Ayla Ergün, Phillip J. Ebert, David Airey, Sara Mostafavi, Lei Yu, Hans‐Ulrich Klein, Gregory W. Carter, David Collier, Todd E. Golde, Allan I. Levey, David A. Bennett, Karol Estrada, T. Matthew Townsend, Bin Zhang, Eric E. Schadt, Philip L. De Jager, Nathan D. Price, Nilüfer Ertekin‐Taner, Zhandong Liu, Joshua M. Shulman, Lara M. Mangravite, Benjamin A. Logsdon

Cell Reports · 2020

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Summary

This meta-analysis synthesises differential gene expression data from 2,114 human postmortem brain samples to construct a consensus transcriptome atlas of Alzheimer's disease across seven brain regions. By cross-referencing 30 identified coexpression modules with 251 differentially expressed gene sets from mouse models of AD and related neurodegenerative diseases, the authors establish transcriptional correspondences that distinguish responses to amyloid versus tau pathology and reveal age- and sex-dependent disease progression signatures. The resource provides a validated framework for preclinical AD studies using mouse models.

Regional applicability

This is a molecular neuroscience study conducted in the United States with no direct applicability to United Kingdom farming systems, soils, or agricultural practice. The findings are relevant to UK-based neuroscience and pharmaceutical research communities investigating Alzheimer's disease mechanisms and translational pathways, but sit outside Vitagri's Pulse Brain's primary remit of farming systems and soil health.

Key measures

Differential gene expression patterns; coexpression modules; human-mouse transcriptional overlap; brain region-specific and pathology-specific expression signatures; age- and sex-dependent expression patterns

Outcomes reported

The study identified 30 brain coexpression modules from seven brain regions as major sources of transcriptional perturbation in Alzheimer's disease, based on meta-analysis of 2,114 postmortem samples. It characterised human-mouse transcriptional overlaps for amyloid versus tau pathology responses and identified age- and sex-dependent expression signatures.

Theme
Nutrition & health
Subject
Other / interdisciplinary
Study type
Meta-analysis
Study design
Meta-analysis
Source type
Peer-reviewed study
Status
Published
Geography
United States
System type
Laboratory / in vitro
DOI
10.1016/j.celrep.2020.107908
Catalogue ID
SNmp7umcbc-ltn7q1

Topic tags

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