Pulse Brain · Growing Health Evidence Index
Tier 3 — Observational / field trialPeer-reviewed

Prioritization of autoimmune disease-associated genetic variants that perturb regulatory element activity in T cells

Kousuke Mouri, Michael H. Guo, Carl G. de Boer, Michelle M. Lissner, Ingrid A. Harten, Gregory A. Newby, Hannah A. DeBerg, Winona F. Platt, Matteo Gentili, David R. Liu, Daniel Campbell, Nir Hacohen, Ryan Tewhey, John Ray

Nature Genetics · 2022

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Summary

This 2022 Nature Genetics study employed high-throughput functional screening in human T cells to identify autoimmune disease-associated genetic variants with demonstrable mechanistic effects on regulatory element activity. Rather than relying on statistical association alone, the authors directly measured functional perturbations in disease-relevant immune cells, prioritizing variants with confirmed biological impact. The work advances understanding of T cell-specific gene regulation in autoimmune disease susceptibility, though it is fundamentally a clinical immunogenetics study with limited direct relevance to agriculture, soil health, or nutritional science.

Regional applicability

This paper is a clinical immunogenetics study without direct application to United Kingdom agricultural practice, soil health, or food system policy. It does not address farming systems, nutrient density, or food-based interventions.

Key measures

Regulatory element activity perturbation in T cells; functional effects of genetic variants; disease association prioritization

Outcomes reported

The study identified and functionally validated autoimmune disease-associated genetic variants that perturb regulatory element activity specifically in T cells, using high-throughput screening to distinguish mechanistically relevant variants from statistical associations alone.

Theme
General food systems / other
Subject
Out of scope / non-food
Study type
Research
Study design
Laboratory / in vitro functional screening study
Source type
Peer-reviewed study
Status
Published
Geography
United States
System type
Other
DOI
10.1038/s41588-022-01056-5
Catalogue ID
SNmq64d90a-41k6yr
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