Pulse Brain · Growing Health Evidence Index
Tier 4 — Narrative / commentaryPeer-reviewed

Leveraging massively parallel reporter assays for evolutionary questions

Irene Gallego Romero, Amanda J. Lea

Genome biology · 2023

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Summary

This is a methodological review examining massively parallel reporter assays (MPRAs) as a tool for understanding how gene regulation drives organismal diversity across evolutionary scales. The authors discuss the practical execution, strengths, and limitations of MPRAs with particular emphasis on their application to evolutionary biology questions, and propose approaches to adapt the technique for use in rare or understudied species with incomplete genomic resources.

Regional applicability

This paper is a general methodological review with no regional specificity. The techniques and principles discussed are applicable globally to any research institution with access to molecular biology facilities and sequencing infrastructure.

Key measures

Not applicable; methodology review rather than empirical study

Outcomes reported

The paper reviews massively parallel reporter assays (MPRAs) as a methodological approach for testing thousands to millions of DNA sequences for regulatory activity simultaneously. It proposes solutions for extending MPRA applications to rare taxa and organisms with limited genomic resources.

Theme
General food systems / other
Subject
Out of scope / non-food
Study type
Narrative Review
Study design
Narrative review
Source type
Peer-reviewed study
Status
Published
System type
Other
DOI
10.1186/s13059-023-02856-6
Catalogue ID
SNmq64d90a-yxz5m8

Topic tags

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