Pulse Brain · Growing Health Evidence Index
Tier 4 — Narrative / commentaryPeer-reviewedOrganic

Soil microbiota manipulation and its role in suppressing soil-borne plant pathogens in organic farming systems under the light of microbiome-assisted strategies

Ugo De Corato

Chemical and Biological Technologies in Agriculture · 2020

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Summary

This review synthesises evidence on how soil microbiota can be strategically manipulated to enhance natural disease suppressiveness against soil-borne pathogens in organic farming systems. De Corato examines agronomic practices (organic amendments, crop rotation, intercropping, and soil pre-fumigation) that reshape microbial communities, and discusses molecular methods—particularly next-generation sequencing—for characterising microbiome dynamics during such interventions. The paper addresses the need for detailed microbiome-assisted strategies to improve consistency and reduce failures in pathogen management without synthetic fungicides.

Regional applicability

The agronomic practices reviewed (crop rotation, intercropping, organic amendments) are directly applicable to UK organic farming systems under UK Organic Standards. However, the abstract does not specify whether studies reviewed were conducted in UK conditions; applicability may depend on soil type, climate adaptation, and local pathogen profiles.

Key measures

Soil microbial community composition and structure (via next-generation sequencing); suppression of soil-borne phytopathogens; microbiome shifts during manipulation; functional outcomes in pathogen disease suppression

Outcomes reported

The review synthesises findings on soil microbiota manipulation strategies and their effects on suppression of soil-borne plant pathogens in organic farming systems. It evaluates agronomic practices including soil pre-fumigation, organic amendment, crop rotation, and intercropping, and discusses the role of next-generation sequencing in characterising soil microbial communities.

Theme
Farming systems, soils & land use
Subject
Soil biology & microbiology
Study type
Narrative Review
Study design
Narrative review
Source type
Peer-reviewed study
Status
Published
System type
Organic systems
DOI
10.1186/s40538-020-00183-7
Catalogue ID
SNmojyxqtx-57uk20

Topic tags

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